As long as the pads and caliper pins moved freely upon installation you will be fine. The reason 1 pads wears more than the other is if the pads or pins are stuck.
You "feel" the difference because you want to "feel" the difference. Since you just spent money on the upgrade you "have" to feel the difference
I'm looking to eliminate the double pump process I have to follow right now to get the pedal hard
2004 300A Procharger #0010 D1X
2003 300A Procharger #0017 D1SC (SOLD. Last I heard, it was in Washington State)